Individual Tree Detection (ITC)

From AWF-Wiki
(Difference between revisions)
Jump to: navigation, search
(Invert the CHM)
Line 12: Line 12:
 
=Invert the CHM=
 
=Invert the CHM=
 
Now the smoothed CHM will be inverted.
 
Now the smoothed CHM will be inverted.
* In the search engine of the Processing Toolbox, type {{typed|text=invert}} and select '''Invert data/no- data''' under Raster tools of SAGA.
+
* In the search engine of the Processing Toolbox, type {{typed|text=invert}} and select '''Invert grid''' under Raster tools of SAGA.
 
* Select the smoothed CHM raster data file from previous step as input layer.
 
* Select the smoothed CHM raster data file from previous step as input layer.
* The smoothing type is {{typed|text=gaussian}}.
+
* Enter name and path for an output file.
* The circular structuring element has a radius of {{typed|text=2}} pixels.
+
* Enter name and path for an temporary output file.
+
 
* Click on {{button|text=Run}}.
 
* Click on {{button|text=Run}}.
[[File:Qgis_smooth_gauss2.png|300px]]
+
[[File:Qgis_smooth_invert.png|300px]]
 
+
  
 
=Watershed segmentation=
 
=Watershed segmentation=

Revision as of 23:30, 6 January 2018

Contents

Filter the CHM derived from LiDAR data

We use a Canopy Height Model (CHM) derived from LiDAR data as decribed here to detect individual tree crowns. Two preprocessing steps prepare a watershed segmentation approach: (1) Gaussian filtering and (2) inversion of a CHM.

  • In the search engine of the Processing Toolbox, type smooth and select Smoothing (gaussian) under Image filtering of the Orfeo Toolbox.
  • Select the CHM raster data file in GeoTiff format as input layer.
  • The smoothing type is gaussian.
  • The circular structuring element has a radius of 2 pixels.
  • Enter name and path for an temporary output file.
  • Click on Run.

Qgis smooth gauss2.png

Invert the CHM

Now the smoothed CHM will be inverted.

  • In the search engine of the Processing Toolbox, type invert and select Invert grid under Raster tools of SAGA.
  • Select the smoothed CHM raster data file from previous step as input layer.
  • Enter name and path for an output file.
  • Click on Run.

Qgis smooth invert.png

Watershed segmentation

Extracting tree heights

Generate a seed grid

Seeded region growing

Personal tools
Namespaces

Variants
Actions
Navigation
Development
Toolbox
Print/export