Unsupervised classification (Tutorial)

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:''In this article, you will learn how to classify a landscape raster via k-means clustering''
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==Unsupervised K-Means classification==
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* In the search engine of the Processing Toolbox, type {{typed|text=kmeans}} and double click '''KMeansClassification''' of OTB.
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* Specify a multispectral image as Input Image.
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* Specify directory and name for the Output image. Select the output data type {{button|text=uint 8}} from the pull-down list.
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* Set the {{button|text=Number of classes}} to {{typed|text=20}}
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* Check the {{button|text=Training set size}} to {{typed|text=10000}}
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* Output pixel type: {{typed|text=uint8}}
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* Click on {{button|text=Run}}.
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[[File:qgis_otb_kmeans.png|400px]]
  
{| class='wikitable floatright'
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* Load the resulting image into QGIS. It is single band file with 20 grey levels labeled from 0 to 19.
|+Table A
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* {{mitem|text=Layer Properties --> Symbology --> Render type}}. Switch to {{button|text=Singleband pseudocolor}} and select a '''Color ramp''' (e.g. Spectral). Select the '''Mode''' {{button|text=Equal interval}} and set the number of classes to {{typed|text=20}}
|-
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!Code
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!Name
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!Cluster number
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!RGB color
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|-
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|1
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|Urban area
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|10,9,15
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|230-000-077
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|-
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|2
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|Cropland
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|16,0,13,3,7,17,18
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|255-255-168
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|-
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|3
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|Pastures/grassland
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|12,8
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|230-230-077
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|-
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|4
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|Broadleaved forest
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|6,2,5,4
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|128-255-000
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|-
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|5
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|Coniferous forest
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|11,19
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|000-166-000
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|-
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|6
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|Water bodies
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|14
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|128-242-230
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|-
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|7
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|Cloud
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|1
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|255-255-255
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|}
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# Classifying an image
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## Add the raster layer ''188_pca_indices.tif'' into a [[QGIS]] project. It should be available in the [[Course data|course data]] (see [[Exercise 06: Digitizing training and test areas|previous exercise]]).
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## Open the k-means classification algorithm provided by the Orfeo toolbox. It can be found in the processing toolbar under {{mitem|text=Toolbox --> Orfeo Toolbox --> Learning --> Unsupervised KMeans image classification}} (see figure '''A''').
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##* Set the ''188_pca_indices'' layer as {{button|text=Input image}}.
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##* Training set size: 100000
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##* Set the {{button|text=Number of classes}} to 20 and the {{button|text=Number of iterations}} to 1000.
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##* The {{button|text=Convergence threshold}} should be set at 0.0001.
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##* Leave all other configurations as they are and click {{button|text=Run}}. The resulting image has 20 classes, labeled from 0 to 19.
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# Image symbology
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## Right-click the classified layer in the [[TOC]] and select {{mitem|text=Properties --> Style}} (see figure '''B''').
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## Set the {{button|text=Render type}} to {{button|text=Singleband pseudocolor}}.
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## Set {{button|text=Color interpolation}} to {{button|text=Discrete}}.
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## In the {{button|text=Load min/max}} section, select the {{button|text=Min/max}} radio button and click {{button|text=Load}} to update the range for classification.
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## Set the {{button|text=Mode}} to {{button|text=Equal interval}} with 20 classes and confirm with {{button|text=Classify}}.
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## Confirm with {{button|text=Apply}} or click {{button|text=OK}} if you are content with your settings.
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# Create a land use/cover classification scheme table as in table '''A'''.
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## As a reference, you may add a google layer to the project:<br/> {{mitem|text=Web --> ObenLayers plugin --> Add Google Satellite layer}}.
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## Set the coordinate reference system
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## Open {{mitem|text=Project --> Project properties}}.
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## Set {{button|text=WGS 84 Pseudo Mercator}} ({{button|text=EPSG 3857}}) as coordinate system
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## Check the {{button|text=Enable on the fly transformation}} box
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## Right click {{button|text=188_pca_indices}} in the [[TOC]] and select {{button|text=Set Project CRS from layer}}.
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## Order the maps in the [[TOC]] so that the classified layer lies above the Google Maps layer.
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## Now, zoom in to some section of the classified layer where the classes can easily be distinguished.
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## Activate and de-activate the layer in the [[TOC]] and compare to the Google layer in order to get an idea of the classes.
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## While doing so, create a table displaying which classes in the classified layer may represent the classes in table '''A'''. You can write it down on a sheet of paper or save it as a text file on your computer. 
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# Change the grid values
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## Select {{mitem|text=Saga --> Grid-Tools --> Reclassify grid values}} from the {{button|text=Processing}} toolbox.
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##* As {{button|text=Grid}}, select the output map from the previous step.
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##* From the {{button|text=Replace condition}} pulldown menu, select {{button|text=[2] Low value <= grid value < high value}}.
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##* Now, open the lookup menu table ({{button|text=...}}) and enter the values you have written down in the previous step.
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##* Set path and name of the output file and launch the algorithm with {{button|text=Run}}.
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# Assign discrete colors to the land cover layer (figure '''C''').
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## Right click the layer in the [[TOC]] or double click to open the layer {{button|text=Properties}}.
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## Select the {{button|text=Style}} tab and set the following options:
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##* For {{button|text=Render type}} select {{button|text=Singleband pseudocolor}}
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##* For {{button|text=Color interpolation}}, select {{button|text=Discrete}}
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##* Set {{button|text=Mode}} to {{button|text=Equal interval}} and {{button|text=Classes}} to 7.
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##* Set {{button|text=Load min/max values}} to {{button|text=Min/max}}.
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##* For better interpretation, you can edit the {{button|text=Label}} column in the classes section according to the class names in table '''A'''.
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##* Don't forget to click {{button|text=Classify}} for adding the classes.
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## Click {{button|text=Load}} and confirm with {{button|text=Apply}} or {{button|text=OK}}.
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==Figures==
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{| class="wikitable" style="border:0pt"
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|style="border:0pt"|[[Image:RemSens_Exercise07_01.png|thumb|450px|'''Figure A:''' Dialogue of the ''Unsupervised K-Means image classification'' plugin from the Orfeo toolbox in [[QGIS]].]]
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|style="border:0pt"|[[Image:RemSens_Exercise07_02.png|thumb|450px|'''Figure B:''' Land cover map produced by the k-means clustering algorithm.]]
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|-
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|style="border:0pt"|[[Image:RemSens_Exercise07_03.png|thumb|450px|'''Figure C:''' Land cover map produced by the k-means clustering algorithm in discrete colors.]]
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|}
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[[Category:Image classification]]
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Latest revision as of 14:37, 24 November 2020

[edit] Unsupervised K-Means classification

  • In the search engine of the Processing Toolbox, type kmeans and double click KMeansClassification of OTB.
  • Specify a multispectral image as Input Image.
  • Specify directory and name for the Output image. Select the output data type uint 8 from the pull-down list.
  • Set the Number of classes to 20
  • Check the Training set size to 10000
  • Output pixel type: uint8
  • Click on Run.

Qgis otb kmeans.png

  • Load the resulting image into QGIS. It is single band file with 20 grey levels labeled from 0 to 19.
  • Layer Properties --> Symbology --> Render type. Switch to Singleband pseudocolor and select a Color ramp (e.g. Spectral). Select the Mode Equal interval and set the number of classes to 20
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